Gagnon Lab
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​Laboratory
of Keith T. Gagnon

at Wake Forest University School of Medicine
Biochemistry Department

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Repeat Expansion Disorders 
CRISPR-Cas systems
​Nuclear RNA Biology
SARS-CoV-2, HIV-1, HBV
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Repeat Expansion RNA
RNA-Guided Enzymes 
Long Noncoding RNA
RNA virus 'omics

Picture

Lab News

​07-01-2023
The Gagnon laboratory officially moved to the Department of Biochemistry in the Wake Forest University School of Medicine.
05-06-2023

Our paper on rapid Mpox genome sequencing with nanopore and lineage tracing was published in Virology Journal! Congratulations to Dr. Mike Bosmeny on this first author paper.
04-12-2023
Our paper on Cas12a RNP assembly dynamics, in collaboration with the Pradeepkumar, Damha, and Moran labs, was published in JBC! 
03-08-2022
Dr. Gagnon is officially promoted to full Professor beginning July 1, 2023!
12-12-2022
Welcome new graduate students to the Gagnon laboratory: Emmanuel Sasu, Lydia Larkai, and Zafeiria Nikolaidi!
07-21-2022
Abadat Yinusa successfully defended her MS thesis. Congratulations Abadat! Good luck at your new industry position.
06-30-2022
Katy Ovington successfully defended her PhD thesis. Congratulations Dr. Ovington! Good luck at your new postdoc position. 
06-20-2022
Rama's paper on how to clone and validate problematic GC-rich and repetitive shRNAs has been accepted in Human Gene Therapy.
04-28-2022
The Gagnon laboratory, in collaboration with the Joao Mamede laboratory (Rush University) has been awarded an NIH R61 from NIAID to study the epitranscriptomics of HIV in patients taking cART and to identify potential therapeutic approaches to address persistent infection.​
01-03-2022

Dr. Michael Bosmeny and Dr. Christopher Barkau join the Gagnon laboratory as postdocs. 
12-17-2021

Christopher Barkau successfully defended his PhD thesis. Congratulations Dr. Chris! 
12-15-2021

New graduate students Solomon Punobyin, Ashmita Dhakal, Patrick Brown, and Jacob Marrs join the Gagnon laboratory. Welcome! 
11-15-2021

Eman and Ramadevi, in collaboration with the Masad Damha laboratory, publish their paper on Cas12a guide RNA chemical modification in Nature Communications. 
09-27-2021

Adrian and the SARS-CoV-2 sequencing team's method paper on how to sequence COVID-19 clinical samples in high throughput is published in JBM. 
02-27-2021
Chris' review on anti-CRISPR technologies close to the clinic is published in Biochemical Pharmacology. 
01-10-2021

The Gagnon lab identifies a new SARS-CoV-2 variant that is dominant in, and specific to, the U.S. 
12-16-2021

Zach's paper using the Broccoli RNA aptamer as a readout for polymerase activity optimization is published in JBC.
12-15-2020
New graduate students Paige Metz and Adam White join the Gagnon laboratory. Welcome! 
10-01-2020

The Gagnon lab is awarded a grant to work with the Chicago CAN Initiative and the Walder Foundation to sequence SARS-CoV-2 genomes and track the emergence of new variants in Chicago and greater Illinois. 
10-01-2020

Fatima El Azzouzi joins our group as a Researcher III technician. Welcome Fatima! ​
09-01-2020

Rourke Sylvain joins our group as a Researcher I technician. Welcome Rourke! ​​
​​​​04-01-2020
Kushal Rohilla successfully defended her PhD thesis work. Congratulations Dr. Kushal! Good luck in your new industry position. ​​
02-28-2020

Eman is awarded the one-year IBK-MIT fellowship to study at the Massachusetts Institute of Technology (MIT) beginning in September 2020! Good luck in your new postdoc position.​​
02-14-2020
Keith was informed that the Dean has approved his tenure with promotion to Associate Professor. ​​
01-16-2020

Our anti-CRISPR nucleic acids are cited in a news article in Nature covering anti-CRISPR technology and gene editing.  ​​
01-13-2020

The Gagnon laboratory is awarded an R21 to investigate the potential repurposing of a class of small molecules as inhibitors of C9ORF72 repeat expansion transcription. ​​
01-03-2020

Keith is awarded an R01 to characterize and develop anti-CRISPR nucleic acids. ​​
12-17-2019

Eman Ageely successfully defended her PhD thesis work! Congratulations Eman! 
12-15-2019

Graduate students Seth Eddington and Abadat Yinusa join the Gagnon laboratory. Welcome 
​​12-14-2019

Courtney Slavich finished with her Masters and graduated. Good luck on your next adventure Courtney! 
​​10-19-2019

The Gagnon lab and Gupta lab travel together to Mizzou to participate in the RNA Cornbelt Meeting. 
​​10-15-2019

Chris gave a talk on his anti-CRISPR work at the OTS meeting in Munich! 
6-10-2019

The New England Journal of Medicine published a commentary by Steven Dowdy covering our recent nucleic acid-based anti-CRISPR research!
6-10-2019
Keith is notified that his NIH R03 proposal was selected for funding.
4-19-2019
Kushal Rohilla is awarded an SIU Dissertation Research Award (DRA).
4-16-2019
Chris Barkau's paper on novel anti-CRISPR small nucleic acid-based inhibitors (CRISPR SNuBs) is accepted for publication in Nucleic Acid Therapeutics and highlighted on the cover with Chris' custom cover art.​
3-23-2019

Keith and Dr. David Corey published guidelines for experiments with antisense oligos and small RNAs in Nucleic Acid Therapeutics.
​3-10-2019
Keith is notified that his NIH R15 proposal was selected for funding.
12-18-2018
Keith is elected to a two-year term on the Oligonucleotide Therapeutics Society (OTS) Board of Directors.
12-15-2018
Zachary Kartje graduated with his PhD and accepted a postdoc position with Jon Watts at the RNA Therapeutics Institute at the UMass Medical Center. Congratulations! 
12-13-2018
Mansi Parasrampuria joins the Gagnon lab to pursue a PhD through the Microbiology, Biochemistry and Molecular Biology graduate program. Welcome!
12-06-2018
Adrian Pater joins the Gagnon lab to pursue a PhD through the Chemistry and Biochemistry graduate program. Welcome!
12-05-2018
The Gagnon lab published a study with the Masad Damha lab on extensively chemically-modified CRISPR RNA in Nucleic Acids Research.
5-10-2018
The Gagnon lab published a study on RNA-DNA chimeric CRISPR-Cas9 in Biochemistry. 
4-28-2018
Zach Kartje is awarded an SIU Dissertation Research Award (DRA).
4-25-2018
Zach Kartje wins first place for his oral presentation at the SIU School of Medicine Gradaute Research Symposium held in Springfield, Illinois.
4-15-2018
Kushal Rohilla wins an SIU Graduate and Professional Graduate Research (GPSC) Award. 
3-15-2018
Courtney Slavich is awarded a 1 year fellowship through the SIU Graduate School.
2-22-2018
Undergraduate assistant and REACH Scholar Helen Mihm's research project on anti-venom aptamers is highlighted in local SIU news. 
1-15-2018
The Gagnon lab is awarded a small internal SIU SOM grant to characterize RNA on the chromatin with a new sequencing technique.  
12-11-2017
Graduate students Katy Ovington, Ramadevi Chilamkurthy, and Courtney Slavich join the Gagnon lab. Welcome! ​​
10
-03-2017
Guide BioSci, Inc. is announced as runner up for the IDT Synthetic Biology challenge at the SynBioBeta meeting in San Francisco. 
08-29-2017
Congratulations to Kushal on publishing her review on RNA biology in repeat expansion disorders.
08-15-2017
Keith starts Guide BioSci, Inc., a precision CRISPR engineering company for biotech and therapeutic applications.
08-15-2017
Keith is awarded the OTS Young Investigator Award for 2017.
04-21-2017
Kushal Rohilla wins first place for her poster presentation at the 27th Annual SIU School of Medicine Graduate Research Symposium!
02-23-2017
Dr. Maria Barton joined the Gagnon lab as a postdoc. Welcome Maria!
11-28-2016
The Gagnon lab has been awarded an ALS research grant from the Judith and Jean Pape Adams Charitable Foundation to explore transcription and splicing of C9ORF72 as a potential therapeutic target for C9FTD/ALS.
11-11-2016
Keith and Kushal attended the 4th RNA Metabolism in Neurological Disease meeting in San Diego where Kushal presented a poster.
09-28-2016
Keith and Zach attended the 12th OTS meeting in Montreal. Congratulations to Zach for winning a poster award!
07-26-2016
Congratulations to Eman, Zach, Kushal and Chris for acceptance of their paper on the Broccoli RNA aptamer to ACS Chemical Biology!
06-24-2016
Eman Ageely successfully defended her M.S. thesis in Chemistry and Biochemistry. Congratulations!
05-10-2016
Undergraduate assistants Gisela Cairo-Baza and Ariadna Cairo-Baza leave for graduate school, Indiana University and UC Merced, respectively, to pursue their Ph.D. degrees.
02-15-2016
The Gagnon lab and Corey lab have published a crystal structure of the C9ORF72 antisense repeat RNA in Biochemistry. 
01-06-2016
The Gagnon lab has been awarded an ALSRP Therapeutic Idea Award through the DoD for developing c9FTD/ALS model cell lines to search for potential ALS small molecule therapeutics.
10-15-2015
Keith attended the 11th OTS meeting in Leiden, The Netherlands and the 3rd RNA Metabolism in Neurological Disease meeting in Chicago, accompanied by Kushal, Zach and Eman.
08-16-2015
Welcome to graduate students Chris Barkay and Aiysha Althobaiti, who officially joined the Gagnon lab. 
06-28-2015
The Gagnon lab has been awarded an ALS Association starter grant to develop and validate cell-based models of c9FTD/ALS.
05-31-2015
Attended the 20th Annual RNA Society Meeting in Madison, Wisconsin. Kushal, Zach and Eman all presented posters on their research progress. 
04-24-2015
Undergraduates Gisela and Tony are awarded scholarships for 2015-2016 through the SIU Chemistry Department.
04-22-2015
Congratulations to Gisela and Ariadna for winning the competitive 2015-2016 REACH Award for their team project proposal.
12-19-2014
The Gagnon lab has been awarded a seed grant through the SIU School of Medicine for team development grant (TDG) proposal, in collaboration with Sean Moran's lab at SIU, to study the aggregation of repeat expansion RNA and dipeptides associated with c9FTD/ALS.
12-15-2014
Official demo begins in Neckers 208 to prepare our newly renovated laboratory. 
11-8-2014
Finally got our Cary 400 (that we bought for a steal on Ebay) running... time to get some melt data!! 
10-30-2014
Graduate student Kushal Rohilla joins the Gagnon lab. Welcome!
10-16-2014
Submitted our first NIH grant, an R03 for probing and detection of repeat expansion RNAs. 
10-13-2014
Submitted a Team Development Grant (TDG) proposal to the SIU School of Medicine. 
10-12-2014
Presented our first original work on detection of repeat expansion sequences at OTS 2014.
08-16-2014
Graduate students Eman Ageely and Zachary Kartje join the Gagnon lab. Welcome!
07-28-2014
Keith T. Gagnon begins his independent career as an assistant professor at SIU.

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AVAILABLE POSITIONS
​
Interested students or prospective postdocs are encouraged to inquire about positions.

RNA, the other nucleic acid
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